Research output per year
Research output per year
- 32 results
Search results
-
2023
A Laccase Gene Reporting System That Enables Genetic Manipulations in a Brown Rot Wood Decomposer Fungus Gloeophyllum trabeum
Li, W., Ayers, C., Huang, W., Schilling, J. S., Cullen, D. & Zhang, J., Jan 2023, In: Microbiology Spectrum. 11, 1Research output: Contribution to journal › Article › peer-review
Open Access2 Scopus citations -
Altered Expression of Two Small Secreted Proteins (ssp4 and ssp6) Affects the Degradation of a Natural Lignocellulosic Substrate by Pleurotus ostreatus
Yarden, O., Zhang, J., Marcus, D., Changwal, C., Mabjeesh, S. J., Lipzen, A., Zhang, Y., Savage, E., Ng, V., Grigoriev, I. V. & Hadar, Y., Dec 2023, In: International journal of molecular sciences. 24, 23, 16828.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Fungal Biodegradation of a Hybrid Adhesive Polymer Containing High-Biomass Content
Castaño, J. D., Hauge, D. A., Haag, A., Severtson, S. J. & Zhang, J., Dec 2023, In: Journal of Polymers and the Environment. 31, 12, p. 5234-5244 11 p.Research output: Contribution to journal › Article › peer-review
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2022
Capturing an Early Gene Induction Event during Wood Decay by the Brown Rot Fungus Rhodonia placenta
Anderson, C. E., Zhang, J., Markillie, L. M., Mitchell, H. D., Chrisler, W. B., Gaffrey, M. J., Orr, G. & Schilling, J. S., Apr 2022, In: Applied and environmental microbiology. 88, 8Research output: Contribution to journal › Article › peer-review
Open Access3 Scopus citations -
Distinctive carbon repression effects in the carbohydrate-selective wood decay fungus Rhodonia placenta
Zhang, J., Meng Markillie, L., Mitchell, H. D., Gaffrey, M. J., Orr, G. & Schilling, J. S., Apr 2022, In: Fungal Genetics and Biology. 159, 103673.Research output: Contribution to journal › Article › peer-review
Open Access5 Scopus citations -
Editorial: Fungal Genetics in Plant Biomass Conversion
Zhang, J., Liu, G. & Fukasawa, Y., Mar 25 2022, In: Frontiers in Microbiology. 13, 875768.Research output: Contribution to journal › Editorial › peer-review
Open Access1 Scopus citations -
Proteome of the Wood Decay Fungus Fomitopsis pinicola Is Altered by Substrate
Sabat, G., Ahrendt, S., Wu, B., Gaskell, J., Held, B. W., Toapanta, C., Vuong, T. V., Lipzen, A., Zhang, J., Schilling, J. S., Master, E., Grigoriev, I. V., Blanchette, R. A., Hibbett, D. S., Bhatnagar, J. & Cullen, D., Sep 2022, In: Microbiology Resource Announcements. 11, 9Research output: Contribution to journal › Article › peer-review
Open Access -
Retraction Note: Evolution of substrate-specific gene expression and RNA editing in brown rot wood-decaying fungi
Wu, B., Gaskell, J., Zhang, J., Toapanta, C., Ahrendt, S., Grigoriev, I. V., Blanchette, R. A., Schilling, J. S., Master, E., Cullen, D. & Hibbett, D. S., Jan 2022, In: ISME Journal. 16, 1, p. 322 1 p.Research output: Contribution to journal › Comment/debate › peer-review
Open Access -
2021
A fungal secretome adapted for stress enabled a radical wood decay mechanism
Castaño, J., Zhang, J., Zhou, M., Tsai, C. F., Lee, J. Y., Nicora, C. & Schilling, J., Aug 2021, In: mBio. 12, 4, e02040-21.Research output: Contribution to journal › Article › peer-review
Open Access12 Scopus citations -
Retracted and Republished from: “Substrate-Specific Differential Gene Expression and RNA Editing in the Brown Rot Fungus Fomitopsis pinicola”
Wu, B., Gaskell, J., Held, B. W., Toapanta, C., Vuong, T. V., Ahrendt, S., Lipzen, A., Zhang, J., Schilling, J. S., Master, E., Grigoriev, I. V., Blanchette, R. A., Cullen, D. & Hibbett, D. S., Jul 2021, In: Applied and environmental microbiology. 87, 16, e00329-21.Research output: Contribution to journal › Article › peer-review
5 Scopus citations -
Retraction for wu et al., “substrate-specific differential gene expression and rna editing in the brown rot fungus fomitopsis pinicola”
Wu, B., Gaskell, J., Held, B. W., Toapanta, C., Vuong, T., Ahrendt, S., Lipzen, A., Zhang, J., Schilling, J. S., Master, E., Grigoriev, I. V., Blanchette, R. A., Cullen, D. & Hibbett, D. S., Jul 2021, In: Applied and environmental microbiology. 87, 16, p. 1 1 p.Research output: Contribution to journal › Comment/debate › peer-review
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Using maldi-fticr-ms imaging to track low-molecular-weight aromatic derivatives of fungal decayed wood
Veličković, D., Zhou, M., Schilling, J. S. & Zhang, J., Aug 2021, In: Journal of Fungi. 7, 8, 609.Research output: Contribution to journal › Article › peer-review
Open Access6 Scopus citations -
2020
Functional Genomics, Transcriptomics, and Proteomics Reveal Distinct Combat Strategies Between Lineages of Wood-Degrading Fungi With Redundant Wood Decay Mechanisms
Presley, G. N., Zhang, J., Purvine, S. O. & Schilling, J. S., Jul 28 2020, In: Frontiers in Microbiology. 11, 1646.Research output: Contribution to journal › Article › peer-review
Open Access13 Scopus citations -
Nanostructural Analysis of Enzymatic and Non-enzymatic Brown Rot Fungal Deconstruction of the Lignocellulose Cell Wall†
Zhu, Y., Plaza, N., Kojima, Y., Yoshida, M., Zhang, J., Jellison, J., Pingali, S. V., O’Neill, H. & Goodell, B., Jun 24 2020, In: Frontiers in Microbiology. 11, 1389.Research output: Contribution to journal › Article › peer-review
Open Access30 Scopus citations -
2019
Evolution of substrate-specific gene expression and RNA editing in brown rot wood-decaying fungi
Wu, B., Gaskell, J., Zhang, J., Toapanta, C., Ahrendt, S., Grigoriev, I. V., Blanchette, R. A., Schilling, J. S., Master, E., Cullen, D. & Hibbett, D. S., Jun 1 2019, In: ISME Journal. 13, 6, p. 1391-1403 13 p.Research output: Contribution to journal › Article › peer-review
Open Access11 Scopus citations -
Fluorescence in situ mRNA hybridization for gene expression detection in a wood decay fungus
Zhang, J., Hu, D., Orr, G. & Schilling, J., Sep 2019, In: International Biodeterioration and Biodegradation. 143, 104731.Research output: Contribution to journal › Article › peer-review
Open Access2 Scopus citations -
Gene regulation shifts shed light on fungal adaption in plant biomass decomposers
Zhang, J., Silverstein, K. A. T., Castaño, J. D., Figueroa, M. & Schilling, J. S., Nov 1 2019, In: mBio. 10, 6, e02176-19.Research output: Contribution to journal › Article › peer-review
Open Access44 Scopus citations -
Reference genes for accurate normalization of gene expression in wood-decomposing fungi
Zhang, J., Mitchell, H. D., Markillie, L. M., Gaffrey, M. J., Orr, G. & Schilling, J., Feb 2019, In: Fungal Genetics and Biology. 123, p. 33-40 8 p.Research output: Contribution to journal › Article › peer-review
Open Access7 Scopus citations -
2018
A genomics-informed study of oxalate and cellulase regulation by brown rot wood-degrading fungi
Presley, G. N., Zhang, J. & Schilling, J. S., Mar 2018, In: Fungal Genetics and Biology. 112, p. 64-70 7 p.Research output: Contribution to journal › Article › peer-review
Open Access29 Scopus citations -
Evaluation of colorimetric assays for determination of H 2 O 2 in planta during fungal wood decomposition
Castaño, J. D., Zhang, J. & Schilling, J. S., Feb 2018, In: Journal of Microbiological Methods. 145, p. 10-13 4 p.Research output: Contribution to journal › Article › peer-review
5 Scopus citations -
Evaluation of colorimetric assays for determination of H 2 O 2 in planta during fungal wood decomposition
Castaño, J. D., Zhang, J. & Schilling, J. S., Feb 2018, In: Journal of Microbiological Methods. 145, p. 10-13 4 p.Research output: Contribution to journal › Article › peer-review
5 Scopus citations -
Oxidative damage control during decay of wood by brown rot fungus using oxygen radicals
Castaño, J. D., Zhang, J., Anderson, C. E. & Schilling, J. S., Nov 1 2018, In: Applied and environmental microbiology. 84, 22, e01937-18.Research output: Contribution to journal › Article › peer-review
Open Access23 Scopus citations -
Substrate-specific differential gene expression and RNA editing in the brown rot fungus Fomitopsis pinicola
Wu, B., Gaskell, J., Held, B. W., Toapanta, C., Vuong, T., Ahrendt, S., Lipzen, A., Zhang, J., Schilling, J. S., Master, E., Grigoriev, I. V., Blanchette, R. A., Cullen, D. & Hibbett, D. S., Aug 1 2018, In: Applied and environmental microbiology. 84, 16, e00991-18.Research output: Contribution to journal › Article › peer-review
21 Scopus citations -
2017
Role of carbon source in the shift from oxidative to hydrolytic wood decomposition by Postia placenta
Zhang, J. & Schilling, J. S., Sep 2017, In: Fungal Genetics and Biology. 106, p. 1-8 8 p.Research output: Contribution to journal › Article › peer-review
Open Access33 Scopus citations -
2016
Localizing gene regulation reveals a staggered wood decay mechanism for the brown rot fungus Postia placenta
Zhang, J., Presley, G. N., Hammel, K. E., Ryu, J. S., Menke, J. R., Figueroa, M., Hu, D., Orr, G. & Schilling, J. S., Sep 27 2016, In: Proceedings of the National Academy of Sciences of the United States of America. 113, 39, p. 10968-10973 6 p.Research output: Contribution to journal › Article › peer-review
Open Access141 Scopus citations -
2015
Widespread polycistronic transcripts in fungi revealed by single-molecule mRNA sequencing
Gordon, S. P., Tseng, E., Salamov, A., Zhang, J., Meng, X., Zhao, Z., Kang, D., Underwood, J., Grigoriev, I. V., Figueroa, M., Schilling, J. S., Chen, F. & Wang, Z., Jul 15 2015, In: PloS one. 10, 7, e0132628.Research output: Contribution to journal › Article › peer-review
Open Access253 Scopus citations -
2014
Construction and direct electrochemistry of orientation controlled laccase electrode
Li, Y., Zhang, J., Huang, X. & Wang, T., Mar 28 2014, In: Biochemical and Biophysical Research Communications. 446, 1, p. 201-205 5 p.Research output: Contribution to journal › Article › peer-review
29 Scopus citations -
2012
Improved biomass saccharification by Trichoderma reesei through heterologous expression of lacA gene from Trametes sp. AH28-2
Zhang, J., Qu, Y., Xiao, P., Wang, X., Wang, T. & He, F., Jun 2012, In: Journal of Bioscience and Bioengineering. 113, 6, p. 697-703 7 p.Research output: Contribution to journal › Article › peer-review
30 Scopus citations -
Improved cellulase production via disruption of PDE01641 in cellulolytic fungus Penicillium decumbens
Zhang, Y., Zhang, J., Xiao, P., Wang, T. & Qu, Y., Nov 2012, In: Bioresource Technology. 123, p. 733-737 5 p.Research output: Contribution to journal › Article › peer-review
14 Scopus citations -
Ras GTPases Modulate Morphogenesis, Sporulation and Cellulase Gene Expression in the Cellulolytic Fungus Trichoderma reesei
Zhang, J., Zhang, Y., Zhong, Y., Qu, Y. & Wang, T., Nov 9 2012, In: PloS one. 7, 11, e48786.Research output: Contribution to journal › Article › peer-review
44 Scopus citations -
2011
Optimal culture conditions for keratinase production by a novel thermophilic Myceliophthora thermophila strain GZUIFR-H49-1
Liang, J. D., Han, Y. F., Zhang, J. W., Du, W., Liang, Z. Q. & Li, Z. Z., Apr 2011, In: Journal of Applied Microbiology. 110, 4, p. 871-880 10 p.Research output: Contribution to journal › Article › peer-review
45 Scopus citations -
2010
Development of the cellulolytic fungus Trichoderma reesei strain with enhanced β-glucosidase and filter paper activity using strong artifical cellobiohydrolase 1 promoter
Zhang, J., Zhong, Y., Zhao, X. & Wang, T., Dec 2010, In: Bioresource Technology. 101, 24, p. 9815-9818 4 p.Research output: Contribution to journal › Article › peer-review
98 Scopus citations