Cost-effectiveness analysis of pre-ART HIV drug resistance testing in Kenyan women

Horacio A. Duarte, Joseph B. Babigumira, Eva A. Enns, David C. Stauffer, Robert W. Shafer, Ingrid A. Beck, Louis P. Garrison, Michael H. Chung, Lisa M. Frenkel, Eran Bendavid

Research output: Contribution to journalArticlepeer-review

3 Scopus citations

Abstract

Background: The prevalence of pre-treatment drug resistance (PDR) to non-nucleoside reverse-transcriptase inhibitor (NNRTI) agents is increasing in sub-Saharan Africa, which may decrease the effectiveness of efavirenz-based antiretroviral therapy (ART) programs. However, due to recent safety concerns, there has been hesitancy to replace efavirenz-based ART with dolutegravir in women of reproductive potential. Our objective was to evaluate whether PDR testing for women not initiating dolutegravir-based ART would be a cost-effective strategy to address the challenges posed by PDR. Methods: We developed an HIV drug resistance model that simulates the emergence and transmission of resistance mutations, calibrated to the Kenyan epidemic. We modeled three care strategies for PDR testing among women not initiating dolutegravir-based ART: no PDR testing, PDR testing with a low-cost point mutation assay, known as oligonucleotide ligation assay (OLA), and PDR testing with consensus sequencing. Using a health sector perspective, this model was used to evaluate the health outcomes, lifetime costs, and cost-effectiveness under each strategy over a 15-year time horizon starting in 2019. Findings: OLA and CS PDR testing were projected to have incremental cost-effectiveness ratios (ICER) of $10,741/QALY gained and $134,396/QALY gained, respectively, which are not cost-effective by national income standards. Viral suppression rates among women at 12 months after ART initiation were 87·8%, 89·0%, and 89·3% with no testing, OLA testing, and CS testing, respectively. PDR testing with OLA and CS were associated with a 0.5% and 0.6% reduction in incidence rate compared to no PDR testing. Initial PDR prevalence among women was 13.1% in 2019. By 2034, this prevalence was 17·6%, 17·4%, and 17·3% with no testing, OLA testing, and CS testing, respectively. Interpretation: PDR testing for women is unlikely to be cost-effective in Kenya whether one uses a low-cost assay, such as OLA, or consensus sequencing. Funding: National Institutes of Health, Gilead Sciences.

Original languageEnglish (US)
Article number100355
JournalEClinicalMedicine
Volume22
DOIs
StatePublished - May 2020

Bibliographical note

Funding Information:
We would like to thank the Seattle Children's Research Institute Research Scientific Computing Group, especially Paul Hodor and Bronson Petterson, for their computational support and expertise. This work was supported by the National Institutes of Health through the following grants: R01 AI100037 (LMF, JBB, IAB, MHC), R24AI136618 (RWS), K25AI118476 (EAE), R01 AI127250 (EB), R01 DA015612 (EB), K12 HD000850 (HAD), and T32 AI07140 (HAD). This work was also supported by a Gilead HIV Research Scholars Program Award (HAD).

Funding Information:
JBB and LGP report personal fees from Roche Molecular Systems outside the submitted work. EE reports personal fees from ViiV Healthcare outside the submitted work. RWS has received grants from Janssen Pharmaceuticals, Vela Diagnostics, and InSilixa, outside the submitted work. All other authors declare no competing interests.

Funding Information:
We would like to thank the Seattle Children's Research Institute Research Scientific Computing Group, especially Paul Hodor and Bronson Petterson, for their computational support and expertise. This work was supported by the National Institutes of Health through the following grants: R01 AI100037 (LMF, JBB, IAB, MHC), R24AI136618 (RWS), K25AI118476 (EAE), R01 AI127250 (EB), R01 DA015612 (EB), K12 HD000850 (HAD), and T32 AI07140 (HAD). This work was also supported by a Gilead HIV Research Scholars Program Award (HAD).

Publisher Copyright:
© 2020 The Author(s)

Keywords

  • Africa
  • Cost-effectiveness analysis
  • Dolutegravir-based ART
  • Drug resistance testing
  • Efavirenz-based ART
  • HIV
  • Pretreatment drug resistance
  • Resource-limited setting

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