TY - JOUR
T1 - Genetic architecture of soybean yield and agronomic traits
AU - Diers, Brian W.
AU - Specht, Jim
AU - Rainey, Katy Martin
AU - Cregan, Perry
AU - Song, Qijian
AU - Ramasubramanian, Vishnu
AU - Graef, George
AU - Nelson, Randall
AU - Schapaugh, William
AU - Wang, Dechun
AU - Shannon, Grover
AU - Mchale, Leah
AU - Kantartzi, Stella K.
AU - Xavier, Alencar
AU - Mian, Rouf
AU - Stupar, Robert M.
AU - Michno, Jean Michel
AU - An, Yong Qiang Charles
AU - Goettel, Wolfgang
AU - Ward, Russell
AU - Fox, Carolyn
AU - Lipka, Alexander E.
AU - Hyten, David
AU - Cary, Troy
AU - Beavis, William D.
N1 - Publisher Copyright:
Copyright © 2018 Reid et al.
PY - 2018/10/1
Y1 - 2018/10/1
N2 - Soybean is the world's leading source of vegetable protein and demand for its seed continues to grow. Breeders have successfully increased soybean yield, but the genetic architecture of yield and key agronomic traits is poorly understood. We developed a 40-mating soybean nested association mapping (NAM) population of 5,600 inbred lines that were characterized by single nucleotide polymorphism (SNP) markers and six agronomic traits in field trials in 22 environments. Analysis of the yield, agronomic, and SNP data revealed 23 significant marker-trait associations for yield, 19 for maturity, 15 for plant height, 17 for plant lodging, and 29 for seed mass. A higher frequency of estimated positive yield alleles was evident from elite founder parents than from exotic founders, although unique desirable alleles from the exotic group were identified, demonstrating the value of expanding the genetic base of US soybean breeding.
AB - Soybean is the world's leading source of vegetable protein and demand for its seed continues to grow. Breeders have successfully increased soybean yield, but the genetic architecture of yield and key agronomic traits is poorly understood. We developed a 40-mating soybean nested association mapping (NAM) population of 5,600 inbred lines that were characterized by single nucleotide polymorphism (SNP) markers and six agronomic traits in field trials in 22 environments. Analysis of the yield, agronomic, and SNP data revealed 23 significant marker-trait associations for yield, 19 for maturity, 15 for plant height, 17 for plant lodging, and 29 for seed mass. A higher frequency of estimated positive yield alleles was evident from elite founder parents than from exotic founders, although unique desirable alleles from the exotic group were identified, demonstrating the value of expanding the genetic base of US soybean breeding.
KW - Multiparent advanced generation inter-cross (MAGIC)
KW - Multiparental populations mpp
KW - Soybean genetic improvement
KW - Yield genetic mapping
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U2 - 10.1534/g3.118.200332
DO - 10.1534/g3.118.200332
M3 - Article
C2 - 30131329
AN - SCOPUS:85054431393
SN - 2160-1836
VL - 8
SP - 3367
EP - 3375
JO - G3: Genes, Genomes, Genetics
JF - G3: Genes, Genomes, Genetics
IS - 10
ER -