TY - JOUR
T1 - The University of Minnesota Biocatalysis/Biodegradation Database
T2 - the first decade.
AU - Ellis, Lynda B.M.
AU - Roe, Dave
AU - Wackett, Lawrence P.
PY - 2006/1/1
Y1 - 2006/1/1
N2 - As the University of Minnesota Biocatalysis/Biodegradation Database (UM-BBD, http://umbbd.ahc.umn.edu/) starts its second decade, it includes information on over 900 compounds, over 600 enzymes, nearly 1000 reactions and about 350 microorganism entries. Its Biochemical Periodic Tables have grown to include biological information for almost all stable, non-noble-gas elements (http://umbbd.ahc.umn.edu/periodic/). Its Pathway Prediction System (PPS) (http://umbbd.ahc.umn.edu/predict/) is now an internationally recognized, open system for predicting microbial catabolism of organic compounds. Graphical display of PPS rules, a stand-alone version of the PPS and guidance for PPS users are being developed. The next decade should see the PPS, and the UM-BBD on which it is based, find increasing use by national and international government agencies, commercial organizations and educational institutions.
AB - As the University of Minnesota Biocatalysis/Biodegradation Database (UM-BBD, http://umbbd.ahc.umn.edu/) starts its second decade, it includes information on over 900 compounds, over 600 enzymes, nearly 1000 reactions and about 350 microorganism entries. Its Biochemical Periodic Tables have grown to include biological information for almost all stable, non-noble-gas elements (http://umbbd.ahc.umn.edu/periodic/). Its Pathway Prediction System (PPS) (http://umbbd.ahc.umn.edu/predict/) is now an internationally recognized, open system for predicting microbial catabolism of organic compounds. Graphical display of PPS rules, a stand-alone version of the PPS and guidance for PPS users are being developed. The next decade should see the PPS, and the UM-BBD on which it is based, find increasing use by national and international government agencies, commercial organizations and educational institutions.
UR - http://www.scopus.com/inward/record.url?scp=33644877427&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=33644877427&partnerID=8YFLogxK
U2 - 10.1093/nar/gkj076
DO - 10.1093/nar/gkj076
M3 - Article
C2 - 16381924
AN - SCOPUS:33644877427
SN - 0305-1048
VL - 34
SP - D517-521
JO - Nucleic acids research
JF - Nucleic acids research
IS - Database issue
ER -